Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNNNDDLHYCSFCNKAQNEVDKLITNSSDGLKVFICNECIELSHKAISQKKGGSFNSDYMSDVKLLLKKPEDIKIFLSKHVVGQEHAQHVLSVAMYNHCQSMAQFNAISDVEIEKSNVMLIGPTGSGKTLLAKTLAKVSDVPFAMADATTLTEAGYVGDDVESVLSRLLQAANYDVAKAQRGIVFIDEIDKITRKSESTSITRDVSGEGVQQALLKIMEGTVAYVPPQGGRKHPQQEFIQVDTNNILFICGGAFEGLNKIIEAR-KKGTSVGFGADISQSKEQKKKNTLHDVQPEDLIKFGLIPEFVGRVPITAVLDELDHEDLVHVLIEPRNALIKQYKALLAFSKVNLEFSDEAISAIAEKAMSYKTGARMLRAILESLLLDVMYTAGNGGFEGSTIVITKEMVELGKAVINHNNKGNVITVND
4I9K Chain:A ((3-324))-------------------------------------------------------------------LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDT-----LGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTL--------DVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRK---------VSGEGVQQALLKLIEGT-----------------LQVDTSKILFICGGAFAGLDKVISHRVE------------------EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY-----------


General information:
TITO was launched using:
RESULT:

Template: 4I9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -213356 for 2095 contacts (-101.8/contact) +
2D Compatibility (PS) -28288 + (NN) -12364 + (LL) 5028
1D Compatibility (HY) -32000 + (ID) 8300
Total energy: -289280.0 ( -138.08 by residue)
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_4I9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I9K-query.scw
PDB file : Tito_Scwrl_4I9K.pdb: