Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDD-----CNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTR---ALVINNPTEMRNCPEKLITSLFPELIPPTLITENISMIRDFYHDYRGIILKPLYSYGGNDVIRI-QNENSIQVVVELMITKYKCPVIAQAFCKNV-NKDKRILLLDGQPIGVMKRVPRVSGEIRTNLRLGASFEPVEMNDRDNEICNKIGPELKKRGLIFVGIDIVDDFLLEINITSPTGVVYINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 1GLV Chain:A ((13-312)) | ---NINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQNYEEWFSFVGEQD--LPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLD----ASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP------VPYC-------LARGGGGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173794 for 2152 contacts (-80.8/contact) +
2D Compatibility (PS) -28828 + (NN) -3262 + (LL) 1424
1D Compatibility (HY) -24800 + (ID) 5100
Total energy: -234360.0 ( -108.90 by residue)
QMean score : 0.453
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