Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNTDQQQGLDSKEKSSEDLKPEKKREMKEAAAELKEGIKKSGAGNQSVGTEVSNQATTQDIDNSKTMEH
4K1M Chain:B ((172-192))
-------------KRSQEDLPPEHRMELSEALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRPFYERTYI
General information:
TITO was launched using:
RESULT:
Template:
4K1M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6950 for 76 contacts (91.4/contact) +
2D Compatibility (PS) -2018 + (NN) -751 + (LL) 528
1D Compatibility (HY) -800 + (ID) 550
Total energy: 3359.0 ( 44.20 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_4K1M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K1M-query.scw
PDB file :
Tito_Scwrl_4K1M.pdb
: