Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDSIKDILELDEELLSNEQKTFKSFYNINIEYSQKWPNITAKKQPLHTAEKYKEKKDKTAYFNENLE
1FRK Chain:A ((4-104))
----VTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAQAIFSEDEVP--------------EDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHLER---
General information:
TITO was launched using:
RESULT:
Template:
1FRK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47063 for 742 contacts (-63.4/contact) +
2D Compatibility (PS) -10327 + (NN) -4165 + (LL) 1564
1D Compatibility (HY) -12800 + (ID) 2950
Total energy: -75741.0 ( -102.08 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1FRK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FRK-query.scw
PDB file :
Tito_Scwrl_1FRK.pdb
: