Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIAIVGLPNAGKSTLFNRILGRKAAVVSNIPGITRDRQEGVGRISDLELKIIDTGGWNDQTNFFLQIVEQIEFSLFSADIIFFLVDAKVQ-NEQNKEFAKWLKRRTNKSVILIANKCESYKSENIDYLQFFDFIGPVYISAEHNLGMVDLYNALAGVIDSSTNFSSVIPKPLPVIKVAGTGIQEKNEQISTLHAENQSNQPNRLRVAIIGRPNVGKSTFLNSLLSENRLITSSEPGTTRDSVDITYNHNGKLITLIDTAGIRRRANLIDNLELKFVKKSMESIKRSHVVVLMLDSLLGIKQQDLSIGEAAIKGGKGIIIVLNKWDLINKDDRSRLIKFVRQQEITRLFLE-VPTVTISALKGIRCSDVIDKCLEVNEFLNKKISTAKVNKWLVDALGRHPHPFVKGRAIRMKYIAQIGTKPPAFSLTCNVPEGVDESYKRYLTNDLRKNFFIDGIPVRLLLKKNKNPYVK |
2HJG Chain:A ((6-436)) | ---VAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEWLNYDFNLID--------PFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKIL-YRTKKPVVLAVNKLDN----NIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA------EHF-----KNIPETKY--------NEEV--------------IQFCLIGRPNVGKSSLVNAMLGEERVIVS---------VDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDE-STMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARARK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249447 for 3110 contacts (-80.2/contact) +
2D Compatibility (PS) -42604 + (NN) -14596 + (LL) 2224
1D Compatibility (HY) -28800 + (ID) 7100
Total energy: -340323.0 ( -109.43 by residue)
QMean score : 0.574
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