Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEIISNFLFDKIKNKQISGVTVNNWNL-RVPI-TQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQ--EVNFFNDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN |
| 1L2B Chain:A ((2-274)) | -PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALIS-HLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVR---------GTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125665 for 2033 contacts (-61.8/contact) +
2D Compatibility (PS) -28327 + (NN) -12481 + (LL) 504
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -187419.0 ( -92.19 by residue)
QMean score : 0.512
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