Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISILGAGAWGTAIANSLSGK-QNVILWTHNKTTFESISRTRESDKLL-GCQIPENVSVKLAIKETVNASAMI-FAVPTQSLRKVCQQLHDCNL-----KKDVAIILACKGIEKSTLKLPSEIVNEVLPNNPVAIFSGPSFAIEVAKKLPYSMVLACQDDTLGSKL--ISELQQENIKLHFSSDVVGVQICAALKNVFAIACGIVLGKKLGFNAHAALVTKSMNEVKTLYLAKTDSVSIDIDTLLGPACLGDLIMTCTSLNSRNLSFGFKIGSSNNSFDAQQTLSEGKSVIEGFSTAQSAFNLAEKLKIKMPICEAVYRLLYESASIEDTISVFVG |
| 1M66 Chain:A ((20-340)) | ----VFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEK-SGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDL----TAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQR------AVAEGVATADPLMRLAKQLKVKMPLCHQIYEIVYKKKNPRDALADLLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267150 for 2748 contacts (-97.2/contact) +
2D Compatibility (PS) -32180 + (NN) -9647 + (LL) 1284
1D Compatibility (HY) -28000 + (ID) 5550
Total energy: -341243.0 ( -124.18 by residue)
QMean score : 0.483
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