Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNVDVLCTKGGISSTGDSGKIY--MNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY
1HNJ Chain:A ((5-317))-----IIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSG-AVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAAS---------EEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF


General information:
TITO was launched using:
RESULT:

Template: 1HNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -269936 for 2916 contacts (-92.6/contact) +
2D Compatibility (PS) -32191 + (NN) -6897 + (LL) 772
1D Compatibility (HY) -25600 + (ID) 7550
Total energy: -341402.0 ( -117.08 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_1HNJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HNJ-query.scw
PDB file : Tito_Scwrl_1HNJ.pdb: