Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVLARTNILDISNIGYYYIILTHKNIMQA----SYKNLRKDITICLKKIK
1NZ0 Chain:A ((43-117))
-----------------------------------------------DYSRLGIVVKRKFGKATRRNKLKRWVREIFRRNKGVIPK-GFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIE
General information:
TITO was launched using:
RESULT:
Template:
1NZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32951 for 398 contacts (-82.8/contact) +
2D Compatibility (PS) -8180 + (NN) -6217 + (LL) 4172
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -50026.0 ( -125.69 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1NZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NZ0-query.scw
PDB file :
Tito_Scwrl_1NZ0.pdb
: