Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHISKDVEKFN-NSSKLSEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
2DNW Chain:A ((5-90))
-SSGMPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDVY
General information:
TITO was launched using:
RESULT:
Template:
2DNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3772 for 554 contacts (-6.8/contact) +
2D Compatibility (PS) -9382 + (NN) -3642 + (LL) 208
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -24788.0 ( -44.74 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_2DNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DNW-query.scw
PDB file :
Tito_Scwrl_2DNW.pdb
: