Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
1O27 Chain:A ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDMGLKDEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDIL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1O27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157547 for 1525 contacts (-103.3/contact) +
2D Compatibility (PS) -21339 + (NN) -2782 + (LL) 5784
1D Compatibility (HY) -19200 + (ID) 4900
Total energy: -199984.0 ( -131.14 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_1O27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O27-query.scw
PDB file :
Tito_Scwrl_1O27.pdb
: