Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDNVAIVFNLTGNNPYNSFDNSTKNSRALEGVKC-----YSASKTEELCKVIKKRVTKKDYRENQESGQDKTPRKCKKLFKKGASPEVLTKLGELLIEQEKYYNNYIQHFLPALKREIIKSKELNLIEKIKIEQIIMKLITSDAVSKNSNESHSNAETNEQSANGADNTLSCTAENSESGNTCEETSLKCWRSLPNLRDNSQFNFGEKLLTKMDTLEPETNASELNNGSGGDSGVSLPGLSEDGLESPLGSERSNVSSILSSAEEDNNLQKEENENQMKLDQTAREELQVQENKNQVSKVSPVQPPKKKKNVEDITMQKLPMNEKKGENILPKEQLSNREFYGIFTTGCALLAIGCFVGAVVIKSRALFLGLSVIAVVFATAAVAVWYLTLPPSSKLMYTNSSPVINNERSLLHV |
| 4MXR Chain:A ((224-273)) | --------FGLTGKNTFFSFDVDSLKSSDMPGVSCPAAVGLSAQEAFDMCFLAGKTPTVMMMDMSELNPLVEEYRSPRVAVYMFYHFVLGFATRP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7338 for 210 contacts (34.9/contact) +
2D Compatibility (PS) -4886 + (NN) -2876 + (LL) 18896
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 14022.0 ( 66.77 by residue)
QMean score : 0.271
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