Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYNEKILDHYENPRNVGSLDKNDPSVGTGLVGAPSCGDVMKLQIKVNDKGVIEDAKFKTFGCGSAIASSSLLTEMIKGKTIEDVTKIKNTQIVEELSLPPVKVHCSVLAEDAIKAAIHDYQSKHSKNES
2KQK Chain:A ((1-125))
MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGAVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK--
General information:
TITO was launched using:
RESULT:
Template:
2KQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36066 for 902 contacts (-40.0/contact) +
2D Compatibility (PS) -13237 + (NN) -5783 + (LL) 36
1D Compatibility (HY) -14800 + (ID) 4550
Total energy: -74400.0 ( -82.48 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2KQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KQK-query.scw
PDB file :
Tito_Scwrl_2KQK.pdb
: