Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEYQGVNTVKKDRKPITITANAVERIRYLLDQKQYTNLERSEEAIGIRVLIKQKGCSGLKYDIEYAYDIHPLESVIEESCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV
2APN Chain:A ((8-114))
---------------PLTFTDAAANKVKSLISEEENTDLK-------LRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKS-----GVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
General information:
TITO was launched using:
RESULT:
Template:
2APN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29352 for 774 contacts (-37.9/contact) +
2D Compatibility (PS) -11604 + (NN) -4457 + (LL) 1252
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -55261.0 ( -71.40 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_2APN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APN-query.scw
PDB file :
Tito_Scwrl_2APN.pdb
: