Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVDIVFRYKDDYNEFVKLLDLKKHSYICRSRQDEKGSDVLLKHMHDKKDRATIKMLMPNKCAVFVSKDRANKFIKNTLKIEVEVLSS
3N8B Chain:A ((50-74))
-----IFVYEENMNEFESNLLK-AIAVIKQKV--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 353 for 94 contacts (3.8/contact) +
2D Compatibility (PS) -2583 + (NN) -1314 + (LL) 4796
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -698.0 ( -7.43 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_3N8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N8B-query.scw
PDB file :
Tito_Scwrl_3N8B.pdb
: