Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLDGRLVAHKHINVNKGELAHRH--STLAGGKPVLCPVLKVEKGKITYIGNNSEHYKPALANLYNAVKN
2AYI Chain:A ((248-297))
----TEEVFTAPHRE--RVEGVVRASRPLALGGTLVEGIFARFERGFAVEVRAEKGEEVLRRLLDTDEGAR
General information:
TITO was launched using:
RESULT:
Template:
2AYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7943 for 221 contacts (35.9/contact) +
2D Compatibility (PS) -5149 + (NN) 1095 + (LL) 752
1D Compatibility (HY) 800 + (ID) 400
Total energy: 5041.0 ( 22.81 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_2AYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AYI-query.scw
PDB file :
Tito_Scwrl_2AYI.pdb
: