Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
3A4M Chain:A ((191-232))
SDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKVDADRVLKEFKDLLNSY-
General information:
TITO was launched using:
RESULT:
Template:
3A4M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9600 for 208 contacts (46.2/contact) +
2D Compatibility (PS) -4698 + (NN) -3831 + (LL) 120
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -609.0 ( -2.93 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3A4M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A4M-query.scw
PDB file :
Tito_Scwrl_3A4M.pdb
: