Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETY-----PHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPPTPCCQLVTEAIVKIV-DDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPNPQQE-DVTFQQIKI--VPNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENR---RKLELLGYKIAAFSNDGVIEAIED---K-HGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA |
| 1L9X Chain:A ((28-275)) | ----------------------------------AKKPIIGILMQKCRNKVMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTE-----------------------------KDYEILF--KSINGILFPGGSVDLRRSDYAK--VAKIFYNLSIQSFDDGD-YFPVWGTCLGFEELSLLISGECLL--TATDT------VDVA--MPLNFTGGQLHSRMFQNFPTELLLSLA-----------VEPLTANFHKWSLS--VKNFTMNEKL-KKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGI-SH-AP-NAVKTAFYLAEFFVNEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123401 for 1923 contacts (-64.2/contact) +
2D Compatibility (PS) -24402 + (NN) -2954 + (LL) 8140
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -152417.0 ( -79.26 by residue)
QMean score : 0.417
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