Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER |
| 1TPX Chain:A ((127-138)) | -------------------------------------------------------------------------------------------------------------------------------------------------GLGGYMLGSAMS-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1005 for 26 contacts (-38.7/contact) +
2D Compatibility (PS) -1181 + (NN) 209 + (LL) 20812
1D Compatibility (HY) -800 + (ID) 150
Total energy: 17885.0 ( 687.88 by residue)
QMean score : -0.558
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