Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQP---LVVVCHALTGN-HLTYGTDD-YPGWWREIIDGGYIPIHD-YQFLTFDVIGSPFGSSSPLN-DPH--------FPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSRAFNEIARQAIHL-------------GGKEGLSIARQLGFLTYRSSKSYD-----------ERFTPD-EVVAYQQHQGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLE----TKVLTMGFIDDLLYPDDQVRALGERFKYHRH--FFVPDN--VGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
3VVM Chain:A ((38-392)) | --------------------FAMRRGGALYGARIAYETFGSLNAARDNAVLVLTALSGDAHAASRPDDPTPGWWEAMVGPGKPVDTDLWHVICVNSLGSCKGSTGPASTDPRTGEPYRLSFPE-LSIEDIADAAAHTVRALGISRLACVVGASMGGMSALALLARHPELARTHISLSGAVHALPFSIAVRSLQREAIRSDPGWLQGHYDEGEGPRRGMLTARKLGMMTYRSAQEWDCRFGRTRIGER-RFGPEFEVESYLDFHAQRFADRFDPNSYLYLSHAMDQFDLGDGGGGGGGAPGALSRMRVERALVMGARTDILFPLSQQQEIADGLSAGGADVSFLPVDTPAGHDAFLVDIERFGPPVAKFLAI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188953 for 2605 contacts (-72.5/contact) +
2D Compatibility (PS) -32786 + (NN) -13957 + (LL) 2056
1D Compatibility (HY) -15600 + (ID) 4750
Total energy: -253990.0 ( -97.50 by residue)
QMean score : 0.392
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