Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKLLISIKEVKIIAIVKNMGVAYVFSKIQPKATIIATITLVFVALALYLVPGLGLIFALFATIPGIVLWNKSIQSFGVSALITVIITTVLGNTFVLSAIILVLIASLIIGQLLKERTSKERMLYVTTVAMSLISLIAFMLLQTFGRIPPSASIVKPFKQTLHEAITMSGADANMTQILEEGFRQATVQLPGFIIIITFLIVLINLIVTFPVLRKFKIAT--PV-FKPLFAWQMSGILLWIYIIVIICLLFTGQPSVFQSILLNFQLVLSLVMYIQGLSVIHFFGKAKGLPNAVTILLLIIGTILTPTTHIVGLLGVIDLSLNLKRIMKNNSKK |
| 3L1L Chain:A ((295-329)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLII--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14532 for 185 contacts (-78.6/contact) +
2D Compatibility (PS) -2959 + (NN) 1837 + (LL) 29612
1D Compatibility (HY) 1600 + (ID) 200
Total energy: 15358.0 ( 83.02 by residue)
QMean score : 0.238
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