Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQDTGNVTNEITIKDIVIYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQQHE
3F6P Chain:A ((1-120))
MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQ-----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73942 for 951 contacts (-77.8/contact) +
2D Compatibility (PS) -13143 + (NN) -7652 + (LL) 7912
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -108375.0 ( -113.96 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_3F6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6P-query.scw
PDB file :
Tito_Scwrl_3F6P.pdb
: