Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKPLPIFILSVLSSLPKARLSKNKIFIVFRFSSVTDKTTQNKKDTREVSRIFYSAIAPDC
1CBG Chain:A ((1-6))
---FKPLPI------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 0 for 11 contacts (0.0/contact) +
2D Compatibility (PS) -616 + (NN) -1218 + (LL) 4288
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 954.0 ( 86.73 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1CBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CBG-query.scw
PDB file :
Tito_Scwrl_1CBG.pdb
: