Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDEKVSSILSIIKKHIDI-----QEKLDTYNGLLGVSVSIHGVVDNEQHVTY-LPFHE-TEGISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNVEIFHK--IEDIFSQEALLHNLSNQLN---------EKMTLSKLIQFYNEKNPV---VVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNE----MPEILEAIKNQFKQYSRNEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA |
1Z6R Chain:A ((17-389)) | ---NAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQEL--------------GLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLER---LTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNL---FNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAAL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206164 for 2707 contacts (-76.2/contact) +
2D Compatibility (PS) -35481 + (NN) -10386 + (LL) 1692
1D Compatibility (HY) -21600 + (ID) 4050
Total energy: -275989.0 ( -101.95 by residue)
QMean score : 0.445
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