Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNIVTSSIHSSEMTGEEHNVLDVRNDDEWRKGHLKQAIHIPHGKLLN--EDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
3ICT Chain:A ((506-576))
---------------------------------------------------LIDVREPNELKQGMIKGSINIPLDELRDRLEEVPVDKD--IYITCQLGMRGYVAARMLMEKGY-KVKNVDGGFK-------
General information:
TITO was launched using:
RESULT:
Template:
3ICT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49481 for 477 contacts (-103.7/contact) +
2D Compatibility (PS) -7540 + (NN) -3209 + (LL) 4404
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -64426.0 ( -135.06 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3ICT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ICT-query.scw
PDB file :
Tito_Scwrl_3ICT.pdb
: