Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTTQELKQYITRLFQLSNNETWECEALEEAAENILPERFINDSPLAHLTLETYTYYNNELHDLSIYPFLMYANNQLISVGYLNHFDMDFLYLT---DTKNTIIDERHLLREGGTHHE
4AOX Chain:A ((329-419))
--------------------------ELLTPKDHAIGAKRIVTDSGY----YETYNRDNVELVDLRSTPIVGMDETGIVTTG--AHYDLDMIVLATGFDAMTGSLDKLEIVGRGG----
General information:
TITO was launched using:
RESULT:
Template:
4AOX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20847 for 310 contacts (-67.2/contact) +
2D Compatibility (PS) -7973 + (NN) 1931 + (LL) 3276
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -30813.0 ( -99.40 by residue)
QMean score : 0.005
(partial model without unconserved sides chains):
PDB file :
Tito_4AOX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AOX-query.scw
PDB file :
Tito_Scwrl_4AOX.pdb
: