Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQYNFEGEKLKLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLLHQDGLITLPE---------HKYKTVAVKSTFGSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS |
4D56 Chain:A ((28-86)) | -----------------------------------------------------------------------------------------------------FKQSIHQ-LFETQVERTPEAVAVLSEQGQLTYEELNTKANQLAHYLRTLGVKS--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3273 for 176 contacts (-18.6/contact) +
2D Compatibility (PS) -4300 + (NN) 992 + (LL) 12868
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 2387.0 ( 13.56 by residue)
QMean score : 0.012
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