Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVIIIFFSIGLILTT-HIIIDKIKSNTK
2JO1 Chain:A ((12-47))
------------------------------DYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQ--
General information:
TITO was launched using:
RESULT:
Template:
2JO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13394 for 132 contacts (-101.5/contact) +
2D Compatibility (PS) -3514 + (NN) -275 + (LL) 2864
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -17419.0 ( -131.96 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_2JO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JO1-query.scw
PDB file :
Tito_Scwrl_2JO1.pdb
: