Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRLLVKATKSVRHQLQDNTLVSPYPGAKEMILIPDITEAINLTNLFELIKNDLKN
4BQ9 Chain:A ((138-180))
-----------------------KITG-YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4BQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5306 for 178 contacts (-29.8/contact) +
2D Compatibility (PS) -4420 + (NN) -472 + (LL) 3936
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -9462.0 ( -53.16 by residue)
QMean score : 0.107
(partial model without unconserved sides chains):
PDB file :
Tito_4BQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BQ9-query.scw
PDB file :
Tito_Scwrl_4BQ9.pdb
: