Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDMLISLVIPVFALLVIGGIIWVIIEGIVHISKKNKAIDNFLNQVNKVSETYKFATAFLFLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPLYKQKKKKQTFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER |
| 2RDD Chain:B ((12-34)) | -----------------------------------------------------------------------------------------------FGLIFYFMILRPQQKRTKEHKKL------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1471 for 86 contacts (17.1/contact) +
2D Compatibility (PS) -2284 + (NN) 127 + (LL) 16600
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 14064.0 ( 163.53 by residue)
QMean score : 0.075
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