Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLNKLVLGIIFLFLVISITAGCGIGKEAEVKKSFEKTLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIINSEMVIQPNNEDMVAKGMVLYMNRNTKTTNGYYYVDVTKDEDEGKPHD---------NEKRYPVKMVDNKIIPTKEIKDKNIKKEIENFKFFVQYGNFKDLSKYKDGDISYNPEVPSYSAKYQVTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGENIYFSDSLHLEPSEDK |
1XG8 Chain:A ((5-96)) | -------------------------------------------------------------------GADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKD---LTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFID--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11672 for 479 contacts (24.4/contact) +
2D Compatibility (PS) -8515 + (NN) -4547 + (LL) 9040
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: 1400.0 ( 2.92 by residue)
QMean score : 0.405
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