Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNKLVLGISFLFLVISITAGCGMGKEAEIKKSFEKTMSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEPMKSKGMVLYMNRNTRTTNGYYYVNVIKGEDKGKHQDNEKRYPVKMVDNKIILTKEIKDENIKIEIENFKFFVQYGNFK----DLENYKDGDISYNPEVPSYSAKYQLTND-----DYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKEENIYFSDGLIFKPSEDK |
| 3OP1 Chain:A ((118-220)) | -------------------------------------------------------------------------------------------------------------------------------------------IKAMNAKIIVAGFDY--TFGSDKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVV---HGN------GYPTANLVLLDR------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20874 for 389 contacts (53.7/contact) +
2D Compatibility (PS) -8884 + (NN) 1076 + (LL) 9940
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: 16806.0 ( 43.20 by residue)
QMean score : 0.174
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