Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLRDTTFLSYLFTIILWGSAFPMIKIALNDFSAESLSAFRLILATIILLPFVIIKKLPTPELRDIPVIFILGFCGFVIYHTALNFGETLISAGISGILVSTTPIFSSALAYIFLKEHFSKWNWLSSLVAFIGISIISISKDDYTTINVLGVFIILLASFSESLYFTFQKKYIEKYGFIAFTLYTIMASSPFMLIFIPEIINDIHGATFTSIVSVLYLAIFPTIIPYVLLAYIVKSVGVSDATM-SLYLTPIVSLLLSYLLLDELPTTLAIIGGIITLLGVSLSNFFQNT |
3B5D Chain:A ((31-105)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -421738 for 2145 contacts (-196.6/contact) +
2D Compatibility (PS) -6231 + (NN) 7862 + (LL) 18920
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -407387.0 ( -189.92 by residue)
QMean score : ?
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