Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFYNILGVLILVMLSTDALDCDIITHLRTSLINFLPIQSLLSALKNPYC
1P71 Chain:A ((74-93))
-----------------------------TRVPAFSAGKLFREKVAPPK-
General information:
TITO was launched using:
RESULT:
Template:
1P71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1365 for 65 contacts (-21.0/contact) +
2D Compatibility (PS) -2248 + (NN) -929 + (LL) 3100
1D Compatibility (HY) 400 + (ID) 150
Total energy: -1192.0 ( -18.34 by residue)
QMean score : -0.073
(partial model without unconserved sides chains):
PDB file :
Tito_1P71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P71-query.scw
PDB file :
Tito_Scwrl_1P71.pdb
: