Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERVLITGGAGFIGSHLVDDLQQ-DYDVYVLDNYRTGKREN---IKSLADDHVF------ELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHK-DAIGHGYNIGTGTFTNLLEVYRIIGELYGKS-----VEHEFKEARKGDIKHSYADISN-LKALGFVPKYTVETGLKDYFNFEVDNIEEVTAKEVEMS |
| 1SB9 Chain:A ((31-340)) | ----LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNML--IAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162635 for 2530 contacts (-64.3/contact) +
2D Compatibility (PS) -30890 + (NN) -7030 + (LL) 2972
1D Compatibility (HY) -18000 + (ID) 5700
Total energy: -221283.0 ( -87.46 by residue)
QMean score : 0.461
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