Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
1OF6 Chain:A ((213-332)) | --------------------------------------------------------------------------------------DACQAAAHSHHFMGVTKHGVAAITTTKG-NEHCFVILRGGK-KGTNYDAKSVAEAKAQLPAGSNGLMIDYSHGNSNKDFRNQPKVNDVVCEQIANGENAITGVMIESN--INEGNQGI-PAEGKA------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36286 for 684 contacts (53.0/contact) +
2D Compatibility (PS) -11919 + (NN) 3868 + (LL) 8608
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: 33743.0 ( 49.33 by residue)
QMean score : 0.140
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