Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMK---DTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
3OA3 Chain:A ((62-269))
------IDHTQLSLSATGSQIDVLCAEAKEYGFATVCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKIV---------
General information:
TITO was launched using:
RESULT:
Template:
3OA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93743 for 1731 contacts (-54.2/contact) +
2D Compatibility (PS) -23197 + (NN) -10164 + (LL) 948
1D Compatibility (HY) -17200 + (ID) 5250
Total energy: -148606.0 ( -85.85 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3OA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OA3-query.scw
PDB file :
Tito_Scwrl_3OA3.pdb
: