Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILVAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQI-MADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT |
3J9O Chain:B ((79-166)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIDKLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDF-ERNLYDISSSDFFKKVYVSEFDQYGGEPYGAI------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10730 for 397 contacts (-27.0/contact) +
2D Compatibility (PS) -8276 + (NN) 7037 + (LL) 20668
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: 1649.0 ( 4.15 by residue)
QMean score : -0.094
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