Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT
2XFT Chain:A ((92-136))
---------------VVLSAPAGVRYILSLTLDSSGLIRILTLKPETVIPDMVTWNDVEE-------
General information:
TITO was launched using:
RESULT:
Template:
2XFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1598 for 184 contacts (8.7/contact) +
2D Compatibility (PS) -5009 + (NN) -1925 + (LL) 1420
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -8166.0 ( -44.38 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_2XFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XFT-query.scw
PDB file :
Tito_Scwrl_2XFT.pdb
: