Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
1IIJ Chain:A ((8-26)) | -----------------------------------------------------------------TFIIATVVGVLLFLILVVV------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5989 for 69 contacts (-86.8/contact) +
2D Compatibility (PS) -1840 + (NN) 996 + (LL) 17440
1D Compatibility (HY) -3200 + (ID) 150
Total energy: 7257.0 ( 105.17 by residue)
QMean score : 0.137
|
|
|