Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNDLLVMSVVYILTSVIMFYINGLSKQFFTYVVGFPIIYFGYICLVNLIKKRSRNN
1RLI Chain:A ((73-87))
------------------------------HILIFATPIYWFGMS-------------
General information:
TITO was launched using:
RESULT:
Template:
1RLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4910 for 40 contacts (-122.8/contact) +
2D Compatibility (PS) -1658 + (NN) -732 + (LL) 3892
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -5608.0 ( -140.20 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_1RLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RLI-query.scw
PDB file :
Tito_Scwrl_1RLI.pdb
: