Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHKGQGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRI-FNNELGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHFQRMKGGVGNAYAEDPKPFIEQLPDGERSLYDL
2B13 Chain:A ((3-132))
-----------------------------------------------HAKDASWLTSRKQLQPYGQYH---GGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGN-STAPHVHFQRMSGGIGNQYAVDPTSYLQ------------
General information:
TITO was launched using:
RESULT:
Template:
2B13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23167 for 998 contacts (-23.2/contact) +
2D Compatibility (PS) -13772 + (NN) -7474 + (LL) 4452
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -49911.0 ( -50.01 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2B13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B13-query.scw
PDB file :
Tito_Scwrl_2B13.pdb
: