Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPF-PEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQK-DHKLVMLFGDNLLDFTDPKEATAES-REALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 3OCY Chain:A ((16-254)) | ----------------------------------------------------LQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKG--KKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLK-KDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 13953 for 1792 contacts (7.8/contact) +
2D Compatibility (PS) -25554 + (NN) -15904 + (LL) 4160
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -42995.0 ( -23.99 by residue)
QMean score : 0.446
|
|
|