Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
4LLN Chain:A ((4-140))
--FTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
General information:
TITO was launched using:
RESULT:
Template:
4LLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36780 for 861 contacts (-42.7/contact) +
2D Compatibility (PS) -14344 + (NN) -4645 + (LL) 312
1D Compatibility (HY) -17600 + (ID) 6850
Total energy: -79907.0 ( -92.81 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_4LLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LLN-query.scw
PDB file :
Tito_Scwrl_4LLN.pdb
: