Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPEEKGSITLSKEAAIIFAT--AKFKPFKNRIKNNPLKTNPFLKLHENKKS
3V5W Chain:G ((44-69))
----------------MAYCEAHAKEDPLLTPV---PASENPFRE-------
General information:
TITO was launched using:
RESULT:
Template:
3V5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6480 for 79 contacts (82.0/contact) +
2D Compatibility (PS) -2426 + (NN) -2077 + (LL) 1440
1D Compatibility (HY) -400 + (ID) 350
Total energy: 2667.0 ( 33.76 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3V5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V5W-query.scw
PDB file :
Tito_Scwrl_3V5W.pdb
: