Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILDELKMTLSHVEADEFSTFASKILHAEHIFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTPAIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG-TNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
1JEO Chain:A ((28-179))
-----------------------NKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCEC----GNVVEFADLTIPLEVK---KSKYLPMGTTFEETALIFLDLVIAEIMKRLNLDESEIIKRHCNL-
General information:
TITO was launched using:
RESULT:
Template:
1JEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81929 for 1171 contacts (-70.0/contact) +
2D Compatibility (PS) -17124 + (NN) -11797 + (LL) 2840
1D Compatibility (HY) -15200 + (ID) 2700
Total energy: -125910.0 ( -107.52 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_1JEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JEO-query.scw
PDB file :
Tito_Scwrl_1JEO.pdb
: