Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLETKDLNLFLGNKHVLKNISLSIPVRGEIIGIMGPNGAGKSSLIKSLIG-EFNATGTKLLYNKPIQQQLQHITYIPQKAHIDLDFP-------ISVEQVILSGCYKEIGWFRRPNKSARDKLKQLLSDLELESLRHRQISELSGGQLQRVLVARALMSESEVYFLDEPFVGIDFSSEKLIMTKIENLKQQ-GKLILIIHHDLSKAKQYFDRIILLNQ-TLRYFGDSEEAMSVTRLNETFMSSTDCSDPSQRSNITC
1Z47 Chain:A ((23-232))
--------IYPGGARSVRGVSFQI-REGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTD------LPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREK----RVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEE----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114320 for 1501 contacts (-76.2/contact) +
2D Compatibility (PS) -21377 + (NN) -7644 + (LL) 2908
1D Compatibility (HY) -12000 + (ID) 3100
Total energy: -155533.0 ( -103.62 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1Z47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z47-query.scw
PDB file :
Tito_Scwrl_1Z47.pdb
: