Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNAINVSTEDTYKKKMDILNIHTAKASEVNENVEKQNHFKHRVNANKSNSFNEQECQVIADRYADKHINDNYGLERISKTNHGYNYVYSNDNSTSKQHVSISNQGIITK
2FDV Chain:A ((271-327))
MTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKM---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FDV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12801 for 246 contacts (-52.0/contact) +
2D Compatibility (PS) -5727 + (NN) -2825 + (LL) 4796
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -19057.0 ( -77.47 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2FDV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FDV-query.scw
PDB file :
Tito_Scwrl_2FDV.pdb
: