Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIDVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQKEHL----VVLEAAFTLAPGKMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPKES |
| 2GQT Chain:A ((11-255)) | ------------------------LKDYTTLGVGGPAELWTVETREELKRA-------TEAPYRVLGNGSNLLVLDEGVPERVIRLAG--EFQTYDLKGWVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALE-AVEVFHDGAFHVYCPEELGFGYRKS-----HLPPGGIVTRVRLKLKERPKEEILRRMAEVDRARKG-QP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQ------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104606 for 1933 contacts (-54.1/contact) +
2D Compatibility (PS) -25735 + (NN) -6346 + (LL) 5780
1D Compatibility (HY) -12400 + (ID) 4300
Total energy: -147607.0 ( -76.36 by residue)
QMean score : 0.635
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