Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFVLAIFTIISASVSLGYSIQACASSHNINAYYALSRSLPLFLLAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVFLF
2ZY9 Chain:A ((438-463))
-----------------------------------------------------------------------------LGVDPALVSNPLVATLSDVTGLLIYL-
General information:
TITO was launched using:
RESULT:
Template:
2ZY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6380 for 93 contacts (-68.6/contact) +
2D Compatibility (PS) -2490 + (NN) 829 + (LL) 8348
1D Compatibility (HY) -800 + (ID) 250
Total energy: -743.0 ( -7.99 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_2ZY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZY9-query.scw
PDB file :
Tito_Scwrl_2ZY9.pdb
: